Entry:  Overview 
Aliases: MetaNetwork-package
Keywords: 
Description: MetaNetwork package
URL: ../../../library/MetaNetwork/html/A0Introduction.html

Entry: MetaNetwork
Aliases: MetaNetwork
Keywords: 
Description: genetic study of metabolites and network reconstruction
URL: ../../../library/MetaNetwork/html/A1MetaNetwork.html

Entry: markers
Aliases: markers
Keywords: datasets
Description: Example marker data
URL: ../../../library/MetaNetwork/html/D1markers.html

Entry: genotypes
Aliases: genotypes
Keywords: datasets
Description: Example genotype data
URL: ../../../library/MetaNetwork/html/D2genotypes.html

Entry: traits
Aliases: traits traits2
Keywords: 
Description: Example traits data
URL: ../../../library/MetaNetwork/html/D3traits.html

Entry: peaks
Aliases: peaks peaks2
Keywords: datasets
Description: Example peak data
URL: ../../../library/MetaNetwork/html/D4peaks.html

Entry: qtlProfiles
Aliases: qtlProfiles
Keywords: datasets
Description: Example qtl profiles
URL: ../../../library/MetaNetwork/html/D5qtlProfiles.html

Entry: qtlSumm
Aliases: qtlSumm
Keywords: datasets
Description: Example QTL summary report
URL: ../../../library/MetaNetwork/html/D6qtlSumm.html

Entry: corrZeroOrder and corrSecondOrder
Aliases: corrZeroOrder corrSecondOrder
Keywords: datasets
Description: Example correlation data
URL: ../../../library/MetaNetwork/html/D7corrZeroOrder.html

Entry: multiplePeaks
Aliases: multiplePeaks
Keywords: datasets
Description: Example Multiple Peaks report
URL: ../../../library/MetaNetwork/html/D8multiplePeaks.html

Entry: loadData
Aliases: loadData
Keywords: 
Description: Load data from csv files
URL: ../../../library/MetaNetwork/html/F01loadData.html

Entry: qtlMapTwoPart
Aliases: qtlMapTwoPart
Keywords: 
Description: QTL test statistic using two-part model
URL: ../../../library/MetaNetwork/html/F02qtlMapTwoPart.html

Entry: qtlThreshold
Aliases: qtlThreshold
Keywords: 
Description: Estimate QTL significance threshold.
URL: ../../../library/MetaNetwork/html/F03qtlThreshold.html

Entry: qtlFDR
Aliases: qtlFDR
Keywords: 
Description: Estimate QTL thresholds for false discovery rate (FDR)
URL: ../../../library/MetaNetwork/html/F04qtlFDR.html

Entry: qtlSummary
Aliases: qtlSummary
Keywords: 
Description: Summarize QTL effects
URL: ../../../library/MetaNetwork/html/F05qtlSummary.html

Entry: qtlSupportInterval
Aliases: qtlSupportInterval
Keywords: 
Description: Estimate QTL support interval
URL: ../../../library/MetaNetwork/html/F06qtlSupportInterval.html

Entry: qtlPlot
Aliases: qtlPlot
Keywords: 
Description: Plot QTL profiles
URL: ../../../library/MetaNetwork/html/F07qtlPlot.html

Entry: qtlCorrZeroOrder
Aliases: qtlCorrZeroOrder
Keywords: 
Description: Calculate the zero-order correlation
URL: ../../../library/MetaNetwork/html/F08qtlCorrZeroOrder.html

Entry: qtlCorrSecondOrder
Aliases: qtlCorrSecondOrder
Keywords: 
Description: Calculate the second-order correlation
URL: ../../../library/MetaNetwork/html/F09qtlCorrSecondOrder.html

Entry: qtlCorrThreshold
Aliases: qtlCorrThreshold
Keywords: 
Description: Estimate correlation threshold
URL: ../../../library/MetaNetwork/html/F10qtlCorrThreshold.html

Entry: createCytoFiles
Aliases: createCytoFiles
Keywords: 
Description: Write Cytoscape visualization files
URL: ../../../library/MetaNetwork/html/F11createCytoFiles.html

Entry: findMultiplePeaks
Aliases: findMultiplePeaks
Keywords: 
Description: Cluster multiple mass peaks based on correlation and mass
URL: ../../../library/MetaNetwork/html/F12findMultiplePeaks.html
